PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc02813.1.g00030.1.sm.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 233aa    MW: 24316.8 Da    PI: 6.5053
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc02813.1.g00030.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.44.3e-192675255
                           AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                  +ykGVr ++ +g+Wv+eIr+p   ++++r++lg++ t+e Aa+a++aa ++l+g
  Zpz_sc02813.1.g00030.1.sm.mk 26 QYKGVRMRS-WGSWVSEIREP---NQKRRIWLGSYATPEAAARAYDAALLCLKG 75
                                  69****998.**********9...336*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.105.0E-302585IPR001471AP2/ERF domain
CDDcd000187.74E-192685No hitNo description
SMARTSM003802.1E-352689IPR001471AP2/ERF domain
PfamPF008472.9E-122675IPR001471AP2/ERF domain
PROSITE profilePS5103222.4052683IPR001471AP2/ERF domain
SuperFamilySSF541714.25E-202684IPR016177DNA-binding domain
PRINTSPR003675.2E-82738IPR001471AP2/ERF domain
PRINTSPR003675.2E-84965IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0034605Biological Processcellular response to heat
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071497Biological Processcellular response to freezing
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MVKSPSNPAA TAFTEGACRG KAAARQYKGV RMRSWGSWVS EIREPNQKRR IWLGSYATPE  60
AAARAYDAAL LCLKGADAVL NFPSSSPSRN LAGGDRGHSD LAAGSVSPRS IQRAAAAAAA  120
AFDTCTSVDA SGDDRCSSSA GASATATTSA SLSPTARRDD RHGPHGQEHT TPSSSAAAIT  180
GSSAQGEEMW TDLLDVLASP KCVDLMAARA APFSSTWEEP EDDGEMTRLW SFC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A3e-132283163ATERF1
2gcc_A3e-132283163ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00156DAPTransfer from AT1G21910Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7276608e-74KJ727660.1 Zea mays clone pUT5587 AP2-EREBP transcription factor (EREB173) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004984707.11e-68PREDICTED: ethylene-responsive transcription factor ERF014
TrEMBLK4AJU81e-68K4AJU8_SETIT; Uncharacterized protein
STRINGSi039170m4e-68(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP108303040
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.15e-26ERF family protein